DEFormats
Differential gene expression data formats converter
Bioconductor version: 3.24 · Package version: 1.41.0
Convert between different data formats used by differential gene expression analysis tools.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DEFormats")Details
| Maintainer | Andrzej Oleś <andrzej.oles@gmail.com> |
| Author | Andrzej Oleś |
| License | GPL-3 |
| URL | https://github.com/aoles/DEFormats |
| Bug Reports | https://github.com/aoles/DEFormats/issues |
| Downloads rank | 721 |
| Source branch | devel |
| biocViews | DifferentialExpression, GeneExpression, ImmunoOncology, RNASeq, Sequencing, Software, Transcription |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | DEFormats_1.41.0.tar.gz |
| Windows binary (x86_64) | DEFormats_1.41.0.zip |
| macOS binary (arm64) | DEFormats_1.41.0.tgz |
| macOS binary (x86_64) | DEFormats_1.41.0.tgz |
Dependencies
Imports: checkmate, data.table, DESeq2, edgeR (>= 3.13.4), GenomicRanges, methods, S4Vectors, stats, SummarizedExperiment
Suggests: BiocStyle (>= 1.8.0), knitr, rmarkdown, testthat