Clomial
Infers clonal composition of a tumor
Bioconductor version: 3.24 · Package version: 1.49.0
Clomial fits binomial distributions to counts obtained from Next Gen Sequencing data of multiple samples of the same tumor. The trained parameters can be interpreted to infer the clonal structure of the tumor.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Clomial")Details
| Maintainer | Habil Zare <zare@u.washington.edu> |
| Author | Habil Zare and Alex Hu |
| License | GPL (>= 2) |
| Downloads rank | 407 |
| Source branch | devel |
| biocViews | Bayesian, Clustering, DNASeq, ExomeSeq, GeneticVariability, Genetics, ImmunoOncology, MultipleComparison, Sequencing, Software, TargetedResequencing |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | Clomial_1.49.0.tar.gz |
| Windows binary (x86_64) | Clomial_1.49.0.zip |
| macOS binary (arm64) | Clomial_1.49.0.tgz |
| macOS binary (x86_64) | Clomial_1.49.0.tgz |