Bioc2026 Registration Open!

CNORfeeder

Integration of CellNOptR to add missing links

Bioconductor version: 3.24 · Package version: 1.53.0

This package integrates literature-constrained and data-driven methods to infer signalling networks from perturbation experiments. It permits to extends a given network with links derived from the data via various inference methods and uses information on physical interactions of proteins to guide and validate the integration of links.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CNORfeeder")

Details

MaintainerAttila Gabor <attila.gabor@uni-heidelberg.de>
AuthorFederica Eduati [aut, cre]
LicenseGPL-3
Downloads rank572
Source branchdevel
biocViewsCellBasedAssays, CellBiology, NetworkInference, Proteomics, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageCNORfeeder_1.53.0.tar.gz
Windows binary (x86_64)CNORfeeder_1.53.0.zip
macOS binary (arm64)CNORfeeder_1.53.0.tgz
macOS binary (x86_64)CNORfeeder_1.53.0.tgz
Dependencies

Depends: R (>= 4.0.0), graph

Imports: CellNOptR (>= 1.4.0)

Suggests: minet, Rgraphviz, RUnit, BiocGenerics, igraph

Enhances: MEIGOR