antiProfilesData

DOI: 10.18129/B9.bioc.antiProfilesData    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see antiProfilesData.

Normal colon and cancer preprocessed affy data for antiProfile building.

Bioconductor version: 3.9

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("antiProfilesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CancerData, ColonCancerData, ExperimentData, MicroarrayData, Tissue
Version	1.20.0
License	Artistic-2.0
Depends	Biobase
Imports
LinkingTo
Suggests	frma, GEOquery, GEOmetadb
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	antiProfiles, epivizr, epivizrChart, messina
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	antiProfilesData_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/antiProfilesData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/antiProfilesData
Package Short Url	https://bioconductor.org/packages/antiProfilesData/
Package Downloads Report	Download Stats