makeDesign {waveTiling} | R Documentation |
Helper function to construct a design matrix to be used in the wavelet-based transcriptome analysis.
makeDesign(design=c("time","circadian","group","factorial"), replics, noGroups, factor.levels=NULL)
design |
character indicating the design of the tiling array experiment. Currently, the following designs are implemented: |
replics |
Numeric vector containing the number of replicates for each group. The vector length should be equal to the indicated number of groups. |
noGroups |
Number of groups in the tiling array experiment |
factor.levels |
Factor levels to use if applying two-factor design |
numeric matrix
Kristof De Beuf <kristof.debeuf@ugent.be>
makeDesign(design="time",replics=rep(3,6),noGroups=6)