write_transfac {universalmotif} | R Documentation |
Convert motifs to TRANSFAC format and write to file.
write_transfac(motifs, file, overwrite = FALSE, append = FALSE)
motifs |
See |
file |
|
overwrite |
|
append |
|
NULL
, invisibly.
Benjamin Jean-Marie Tremblay, b2tremblay@uwaterloo.ca
Wingender E, Dietze P, Karas H, Knuppel R (1996). “TRANSFAC: A Database on Transcription Factors and Their DNA Binding Sites.” Nucleic Acids Research, 24, 238-241.
Other write_motifs: write_homer
,
write_jaspar
, write_matrix
,
write_meme
, write_motifs
jaspar <- read_jaspar(system.file("extdata", "jaspar.txt", package = "universalmotif")) write_transfac(jaspar, tempfile())