summarizeToGene {tximport} | R Documentation |
Summarizes abundances, counts, lengths, (and inferential replicates or variance) from transcript- to gene-level.
summarizeToGene(object, ...) ## S4 method for signature 'list' summarizeToGene(object, tx2gene, varReduce = FALSE, ignoreTxVersion = FALSE, ignoreAfterBar = FALSE, countsFromAbundance = c("no", "scaledTPM", "lengthScaledTPM"))
object |
the list of matrices of trancript-level abundances,
counts, lengths produced by |
... |
additional arguments, ignored |
tx2gene |
see |
varReduce |
see |
ignoreTxVersion |
see |
ignoreAfterBar |
see |
countsFromAbundance |
see |
a list of matrices of gene-level abundances, counts, lengths, (and inferential replicates or variance if inferential replicates are present).