getRegulators,Solver-method {trena} | R Documentation |
Retrieve the candiate regulators from a Solver object
## S4 method for signature 'Solver' getRegulators(obj)
obj |
An object of class Solver |
The candidate regulators associated with a Solver object
# Create a Solver object using the included Alzheimer's data and retrieve the regulators load(system.file(package="trena", "extdata/ampAD.154genes.mef2cTFs.278samples.RData")) targetGene <- "MEF2C" candidateRegulators <- setdiff(rownames(mtx.sub), targetGene) solver <- Solver(mtx.sub, targetGene, candidateRegulators) regs <- getRegulators(solver)