getSexInfo {sesame}R Documentation

Get sex-related information

Description

The function takes a SigSet and returns a vector of three numerics: the median intensity of chrY probes; the median intensity of chrX probes; and fraction of intermediate chrX probes. chrX and chrY probes excludes pseudo-autosomal probes.

Usage

getSexInfo(sset)

Arguments

sset

a SigSet

Value

medianY and medianX, fraction of XCI, methylated and unmethylated X probes, median intensities of auto-chromosomes.

Examples

sset <- makeExampleSeSAMeDataSet()
getSexInfo(sset)

[Package sesame version 1.2.0 Index]