inferTypeIChannel {sesame}R Documentation

Infer and reset color channel for Type-I probes instead of using what is specified in manifest

Description

Infer and reset color channel for Type-I probes instead of using what is specified in manifest

Usage

inferTypeIChannel(sset, switch_failed = FALSE, verbose = TRUE,
  summary = FALSE)

Arguments

sset

a SigSet

switch_failed

whether to switch failed probes (default to FALSE)

verbose

whether to print correction summary

summary

return summarized numbers only.

Value

a SigSet, or numerics if summary == TRUE

Examples


sset <- sesameDataGet('EPIC.1.LNCaP')$sset
inferTypeIChannel(sset)


[Package sesame version 1.2.0 Index]