detectionPnegNorm {sesame} | R Documentation |
The function takes a SigSet
as input, computes detection p-value
using negative control probes parametrized in a normal distribution and
returns a new SigSet
with an updated pval slot.
detectionPnegNorm(sset)
sset |
a |
Background of Grn and Red are estimated separately from negative control probes-parameterized normal distribution. p-value is taken from the minimum of the p-value of the two alleles (color depends on probe design).
detection p-value
sset <- makeExampleSeSAMeDataSet() sset <- detectionPnegNorm(sset)