filter {scater}R Documentation

Return SingleCellExperiment with cells matching conditions (deprecated).

Description

Subsets the columns (cells) of a SingleCellExperiment based on matching conditions in the rows of colData(object).

Usage

filter(object, ...)

## S4 method for signature 'SingleCellExperiment'
filter(object, ...)

Arguments

object

A SingleCellExperiment object.

...

Additional arguments to be passed to dplyr::filter to act on colData(object).

Details

Refer to https://github.com/sa-lee/plyexperiment for replacement functionality.

Value

An SingleCellExperiment object.


[Package scater version 1.12.2 Index]