gc_per_read {qckitfastq} | R Documentation |
Calculate GC nucleotide sequence content per read of the FASTQ gzipped file
gc_per_read(infile)
infile |
A string giving the path for the fastqfile |
GC content perncentage per read
infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq") gc_per_read(infile)[1:10]