plot_GC_content {qckitfastq}R Documentation

Generate mean GC content histogram.

Description

Generate mean GC content histogram.

Usage

plot_GC_content(gc_df, output_file = NA)

Arguments

gc_df

the object that is the GC content vectors generated from GC content function

output_file

File to write plot to. Will not write to file if NA. Default NA.

Value

A histogram of mean GC content.

Examples


infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
gc_df<-GC_content(infile)
plot_GC_content(gc_df)


[Package qckitfastq version 1.0.1 Index]