phyloseq_to_metagenomeSeq {phyloseq} | R Documentation |
No testing is performed by this function. The phyloseq data is converted
to the relevant MRexperiment-class
object, which can then be
tested in the zero-inflated mixture model framework
(e.g. fitZig
)
in the metagenomeSeq package.
See the
phyloseq-extensions
tutorials for more details.
phyloseq_to_metagenomeSeq(physeq, ...)
physeq |
(Required). |
... |
(Optional). Additional named arguments passed
to |
A MRexperiment-class
object.
fitTimeSeries
fitLogNormal
fitZig
MRtable
MRfulltable
# Check out the vignette metagenomeSeq for more details. # vignette("metagenomeSeq") data(soilrep) phyloseq_to_metagenomeSeq(soilrep)