minSpanningTree<- {monocle}R Documentation

Set the minimum spanning tree generated by Monocle during cell ordering.

Description

Sets the minimum spanning tree used by Monocle during cell ordering. Not intended to be called directly.

Usage

minSpanningTree(cds) <- value

Arguments

cds

A CellDataSet object.

value

an igraph object describing the minimum spanning tree.

Value

An updated CellDataSet object

Examples

## Not run: 
cds <- minSpanningTree(T)

## End(Not run)

[Package monocle version 2.12.0 Index]