CellType {monocle}R Documentation

The CellType class

Description

Classifies cells using a criterion function.

Details

Classifies cells via a user-defined gating function. The gating function accepts as input the entire matrix of expression data from a CellDataSet, and return TRUE or FALSE for each cell in it, depending on whether each meets the criteria in the gating function

Slots

classify_func:

A function that accepts a matrix of expression values as input, and returns a logical vector (of length equal to the number of columns in the matrix) as output


[Package monocle version 2.12.0 Index]