plot_ordering_genes {monocle}R Documentation

Plots genes by mean vs. dispersion, highlighting those selected for ordering

Description

Each gray point in the plot is a gene. The black dots are those that were included in the last call to setOrderingFilter. The red curve shows the mean-variance model learning by estimateDispersions().

Usage

plot_ordering_genes(cds)

Arguments

cds

The CellDataSet to be used for the plot.


[Package monocle version 2.12.0 Index]