get_classes-ConsensusPartitionList-method {cola} | R Documentation |
Get class IDs from the ConsensusPartitionList object
## S4 method for signature 'ConsensusPartitionList' get_classes(object, k)
object |
A |
k |
Number of partitions. |
The class IDs are inferred by merging partitions from all methods by weighting the mean silhouette scores in each method.
A data frame with class IDs and other columns which are entropy of the percent membership matrix and the silhouette scores which measure the stability of a sample to stay in its group.
Zuguang Gu <z.gu@dkfz.de>
data(cola_rl) get_classes(cola_rl, k = 2)