bgAdjust {charm} | R Documentation |
Estimate and remove background signal using anti-genomic background probes
bgAdjust(dat, copy=TRUE)
dat |
a TilingFeatureSet |
copy |
Only relevant when using disk-backed objects. If TRUE a copy will be made leaving the original object (dat) unchanged. The input object will not be preserved if copy=FALSE |
Background signal removal using a modified version of the RMA convolution model. The background signal level is estimated within GC-strata using anti-genomic background probes.
a TilingFeatureSet
Martin Aryee <aryee@jhu.edu>
# See normalizeBetweenSamples