plotGridSearchPerplexity {celda} | R Documentation |
Visualize perplexity of every model in a celdaList, by unique K/L combinations
plotGridSearchPerplexity(celdaList, sep = 1)
celdaList |
Object of class 'celdaList'. |
sep |
Numeric. Breaks in the x axis of the resulting plo.t. |
A ggplot plot object showing perplexity as a function of clustering parameters.
data(celdaCGSim, celdaCGGridSearchRes) ## Run various combinations of parameters with 'celdaGridSearch' celdaCGGridSearchRes <- resamplePerplexity( celdaCGSim$counts, celdaCGGridSearchRes) plotGridSearchPerplexity(celdaCGGridSearchRes)