compareCountMatrix {celda}R Documentation

Check count matrix consistency

Description

Checks if the counts matrix is the same one used to generate the celda model object by comparing dimensions and MD5 checksum.

Usage

compareCountMatrix(counts, celdaMod, errorOnMismatch = TRUE)

Arguments

counts

Integer matrix. Rows represent features and columns represent cells.

celdaMod

Celda model object.

errorOnMismatch

Logical. Whether to throw an error in the event of a mismatch. Default TRUE.

Value

Returns TRUE if provided count matrix matches the one used in the celda object and/or 'errorOnMismatch = FALSE', FALSE otherwise.

Examples

data(celdaCGSim, celdaCGMod)
compareCountMatrix(celdaCGSim$counts, celdaCGMod, errorOnMismatch = FALSE)

[Package celda version 1.0.4 Index]