newick {ccfindR} | R Documentation |
Generate Newick format tree string from tree list object
newick(tree, parent = "1.1", string = "")
tree |
Tree list object from |
parent |
Parent ID |
string |
Newick string of parent tree |
String of newick tree
set.seed(1) x <- simulate_whx(nrow=50,ncol=100,rank=5) s <- scNMFSet(x$x) s <- vb_factorize(s,ranks=seq(2,8),nrun=5) tree <- build_tree(s,rmax=5) nw <- newick(tree=tree) nw