correlatePerCellLine {cTRAP} | R Documentation |
Correlate differential expression scores per cell line
correlatePerCellLine(cellLine, diffExprGenes, perturbations, method, pAdjustMethod = "BH")
cellLine |
Character: cell line(s) |
diffExprGenes |
Numeric: named vector of differentially expressed genes where the name of the vector are gene names and the values are a statistic that represents significance and magnitude of differentially expressed genes (e.g. t-statistics) |
perturbations |
|
method |
Character: correlation method |
pAdjustMethod |
Character: method for p-value adjustment (for more
details, see |
Data frame with correlations statistics, p-value and q-value