filterL1000metadata {cTRAP}R Documentation

Filter L1000 metadata

Description

Filter L1000 metadata

Usage

filterL1000metadata(metadata, cellLine = NULL, timepoint = NULL,
  dosage = NULL, perturbationType = NULL)

Arguments

metadata

Data frame: metadata

cellLine

Character: cell line (if NULL, all values are loaded)

timepoint

Character: timepoint (if NULL, all values are loaded)

dosage

Character: dosage (if NULL, all values are loaded)

perturbationType

Character: type of perturbation (if NULL, all perturbation types are loaded)

Value

Filtered L1000 metadata

Examples

data("l1000metadata")
# l1000metadata <- downloadL1000data("l1000metadata.txt", "metadata")
filterL1000metadata(l1000metadata, cellLine="HEPG2", timepoint="2 h",
                    dosage="25 ng/mL")

[Package cTRAP version 1.2.0 Index]