pdfQC {beadarraySNP}R Documentation

QCreport

Description

Create PDF file with experimental quality control plots

Usage

pdfQC(object, filename = "arrayQC.pdf", by = 10)

Arguments

object

QCIllumina object, or list of QCIllumina objects

filename

character, output pdf filename

by

number of samples in barplot, see reportSamplePanelQC

Details

This function creates a pdf file with QC information. The first page contains 8 plotQC panels showing the spatial distribution of intensities on a SAM plate. The following page(s) contain the output of reportSamplePanelQC

Value

A PDF file is produced

Author(s)

Jan Oosting

See Also

plotQC, reportSamplePanelQC, QCIllumina-class


[Package beadarraySNP version 1.50.0 Index]