HMM-class {VanillaICE} | R Documentation |
The contructor HMM
creates and object of class
HMM
. Not typically called directly by the user.
HMM(granges = GRanges(), param = HmmParam(), posterior = matrix(), filters = FilterParam()) ## S4 method for signature 'HMM' state(object) ## S4 method for signature 'HMM' show(object)
granges |
a |
param |
a |
posterior |
matrix of posterior probabilities |
filters |
an object of class |
object |
a |
granges
a GRanges
object
param
a HmmParam
object
posterior
a matrix of posterior probabilities
filters
a FilterParam
object
data(snp_exp) hmm_list <- hmm2(snp_exp[,1]) resultsFirstSample <- hmm_list[[1]] resultsFirstSample HMM()