computexCellScore {TNBC.CMS} | R Documentation |
Computes a microenvironment score. This function wraps around
the xCellAnalysis
function of the xCell
package to
compute a microenvironment score.
computexCellScore(mat, rnaseq)
mat |
A matrix of gene expression with genes in rows and samples in columns (rownames corresopnding to gene symbol). |
rnaseq |
logical to determine if input data is RNA-Seq gene expression profile |
A data frame containing stromal and immune scores