get_cu {SynMut}R Documentation

Get codon usage matrix

Description

Access the codon usage matrix

Usage

get_cu(object, ...)

## S4 method for signature 'regioned_dna'
get_cu(object)

## S4 method for signature 'DNAStringSet'
get_cu(object)

Arguments

object

regioned_dna / DNAStringSet

...

...

Value

matrix

See Also

input_seq, get_region, get_nu, get_du, get_freq, get_rscu

Examples

filepath <- system.file("extdata", "example.fasta", package = "SynMut")
rgd.seq <- input_seq(filepath)
get_cu(rgd.seq)

[Package SynMut version 1.0.1 Index]