SIMLR_Feature_Ranking {SIMLR}R Documentation

SIMLR Feature Ranking

Description

perform the SIMLR feature ranking algorithm. This takes as input the original input data and the corresponding similarity matrix computed by SIMLR

Usage

SIMLR_Feature_Ranking(A, X)

Arguments

A

an (n x n) similarity matrix by SIMLR

X

an (m x n) data matrix of gene expression measurements of individual cells

Value

a list of 2 elements: pvalues and ranking ordering over the n covariates as estimated by the method

Examples

SIMLR_Feature_Ranking(A = BuettnerFlorian$results$S, X = BuettnerFlorian$in_X)


[Package SIMLR version 1.10.0 Index]