baseQualityStats {R453Plus1Toolbox}R Documentation

Statistics Of Base Quality

Description

This function returns mean, minimum, maximum and standard deviation of the base quality scores over all sequences.

Usage

  baseQualityStats(object)

Arguments

object

An object of class QualityScaledDNAStringSet, ShortReadQ or SFFContainer.

Value

A numeric vector with four slots: mean, min, max, sd.

Author(s)

Christian Ruckert


[Package R453Plus1Toolbox version 1.34.0 Index]