baseQualityHist {R453Plus1Toolbox}R Documentation

Plot A Histogram Of The Base Qualities.

Description

Create a histogram based on the quality of every single base from all sequences.

Usage

  baseQualityHist(object, xlab="Quality score", ylab="Number of bases", col="firebrick1", breaks=40,
     ...)

Arguments

object

An object of class QualityScaledDNAStringSet, ShortReadQ or SFFContainer.

xlab

The X axis label.

ylab

The Y axis label.

col

The plotting color.

breaks

The number of breaks in the histogram (see ‘hist’).

...

Arguments to be passed to methods, such as graphical parameters (see ‘par’).

Author(s)

Christian Ruckert


[Package R453Plus1Toolbox version 1.34.0 Index]