highlightFilters {QDNAseq} | R Documentation |
Highlights data points in a plotted profile to evaluate filtering.
highlightFilters(object, col="red", residual=NA, blacklist=NA, mappability=NA, bases=NA, type="union", ...)
object |
A |
col |
The color used for highlighting. |
residual |
Either a |
blacklist |
Either a |
mappability |
A |
bases |
A |
type |
When specifying multiple filters ( |
... |
Further arguments to |
Ilari Scheinin
data(LGG150) readCounts <- LGG150 plot(readCounts) highlightFilters(readCounts, residual=TRUE, blacklist=TRUE)