plotSigScatter {NormalyzerDE} | R Documentation |
Takes an NormalyzerStatistics instance and generates and prints a vulcano plot
plotSigScatter(nst, jobName, currentLayout, pageno, type = "Vulcano", sigThres = 0.1, sigThresType = "fdr", log2FoldThres = 0)
nst |
NormalyzerDE statistics object. |
jobName |
Name of processing run. |
currentLayout |
Layout used for document. |
pageno |
Current page number. |
type |
Specify whether to plot 'Vulcano' or 'MA'. |
sigThres |
FDR threshold for DE coloring. |
None