makeMetaboliteNetwork {NetPathMiner} | R Documentation |
This function removes reaction nodes keeping them as edge attributes. The resulting network contains metabolite nodes only, where edges indicate that reaction conversions.
makeMetaboliteNetwork(graph)
graph |
A metabolic network. |
A reaction network.
Ahmed Mohamed
Other Network processing methods: expandComplexes
,
makeReactionNetwork
,
reindexNetwork
,
rmSmallCompounds
,
simplifyReactionNetwork
,
vertexDeleteReconnect
## Conver a metabolic network to a metbolite network. data(ex_sbml) # bipartite metabolic network of Carbohydrate metabolism. mgraph <- makeMetaboliteNetwork(ex_sbml)