plotSig {NADfinder} | R Documentation |
Plot signals with ideograms for GRangesList.
plotSig(ideo, grList, mcolName, ...)
ideo |
Output of loadIdeogram. |
grList |
A GRangesList of data to plot. |
mcolName |
Column name of metadata of GRangesList for plotting. |
... |
Parameters to pass to ideogramPlot |
Invisible argument list for ideogramPlot.
library(trackViewer) #ideo <- loadIdeogram("mm10") ideo <- readRDS(system.file("extdata", "ideo.mm10.rds", package = "NADfinder")) gr1 <- gr2 <- ideo mcols(gr1) <- DataFrame(score=runif(length(gr1))) mcols(gr2) <- DataFrame(score=runif(length(gr2))) grList <- GRangesList(gr1, gr2) plotSig(ideo, grList, mcolName="score", layout=list("chr1"))