MSigDB.TF {GIGSEA}R Documentation

MSigDB.TF

Description

Gene sets that share upstream cis-regulatory motifs which can function as potential transcription factor binding sites.

Usage

MSigDB.TF

Format

A list with two items:

net

a sparse matrix, the connectivity between terms and genes, comprising 615 TFs (column) and 12774 genes (row)

annot

a data frame, description of terms

...

Source

software.broadinstitute.org/gsea/msigdb/collections.jsp#C3


[Package GIGSEA version 1.2.0 Index]