getVariantSet {GA4GHclient} | R Documentation |
Get a variant set by its ID.
getVariantSet(host, variantSetId, asVCFHeader = TRUE)
host |
URL of GA4GH API data server. |
variantSetId |
The ID of the VariantSet to be retrieved. |
asVCFHeader |
If |
This function requests GET host/variantsets/variantSetId
.
DataFrame
object. It can be converted
into VCFHeader
object.
DataFrame
, searchVariantSets
,
VCFHeader
, makeVCFHeaderFromGA4GHResponse
host <- "http://1kgenomes.ga4gh.org/" ## Not run: datasetId <- searchDatasets(host, nrows = 1)$id variantSetId <- searchVariantSets(host, datasetId, nrows = 1)$id getVariantSet(host, variantSetId) getVariantSet(host, variantSetId, asVCF = FALSE) ## End(Not run)