filterCounts {EBSEA}R Documentation

Filter Count Data

Description

The exons are filtered based on their expression levels so that each exon has a mean greater than 1 or user defined mean.

Usage

filterCounts(x, mean)

Arguments

x

A numeric dataframe of counts in the sample with gene and exon number as the row names and samples as the column names

mean

The mean value to filter the genes below the threshold

Value

A dataframe of filtered counts of exons

See Also

EBSEA

Examples

data(origCounts)
res <- filterCounts(origCounts)

[Package EBSEA version 1.12.0 Index]