get.strains {DOQTL} | R Documentation |
Get available strain names for a set of strains from a variant file.
get.strains( file = "http://cgd.jax.org/tools/SNPtools/Build38/sanger.snps.NCBI38.txt.gz")
file |
Character, full path to the variants file to use. Default is the file at the Center for Genome Dynamics at The Jackson Laboratory. |
Character vector of strain names in the variant file.
Daniel Gatti
## Not run: available.strains = get.strains() strains = available.strains[c(2, 5, 8, 9, 13:15, 17)] snps = get.variants(chr = 7, start = 103, end = 105, strains = strains) ## End(Not run)