cutAndPlot {CellNOptR} | R Documentation |
This function takes a model and cnolist as well as a list of optimised bitstring at different time points. It calls the appropriate cutAndPlotResultsTX function.
cutAndPlot(CNOlist, model, bStrings, plotPDF=FALSE, tag=NULL, plotParams = list(maxrow = 10))
CNOlist |
a CNOlist, corresponding to the optimisation one |
model |
a model (the full one that was used for optimisation) |
bStrings |
a bitstring for T1 as output by gaBinaryT1 (i.e. a vector of 1s and 0s) |
plotPDF |
TRUE or FALSE; tells whether you want a pdf to be produced or not |
tag |
NULL or string; tells whether you want to prefix filenames with a tag (replaces the default behaviour). |
plotParams |
a list of option related to the PDF and plotting outputs. (1) maxrow is the maximum number of row used to plot the results. See plotOptimResultsPan for other fields. |
This function returns nothing. It plots a graph in your graphic window and sqve it in a file if asked
T. Cokelaer
#load data data(CNOlistToy,package="CellNOptR") data(ToyModel,package="CellNOptR") #pre-process model model = preprocessing(CNOlistToy, ToyModel) cutAndPlot(CNOlistToy, model, bStrings=list(rep(1,length(model$reacID))), plotPDF=FALSE)