plotcvExpr {CHARGE}R Documentation

plotcvExpr

Description

Plots the coefficient of variation or expression variation for each gene over a defined genomic region.

Usage

plotcvExpr(cvExpr)

Arguments

cvExpr

The output from cvExpr function.

Details

Generates a bar plot showing the coefficient of variation or expression variation for each gene on the Y axis. The red, blue, green and gold horizontal lines show the 0

Value

Returns a barplot showing the CV for each gene identifier over the region of interest.

Author(s)

Benjamin Mayne

Examples

library(GenomicRanges)
data(datExprs)
chr21 <- GRanges("21:1-46709983")
cvExpr.out <- cvExpr(se = datExprs, region = chr21)
plotcvExpr(cvExpr = cvExpr.out)

[Package CHARGE version 1.4.0 Index]