SignedGenesets {BioQC} | R Documentation |
Convert a list to a SignedGenesets object
SignedGenesets(list)
list |
A list of genesets; each geneset is a list of at least three fields: 'name', 'pos', and 'neg'. 'name' contains one non-null character string, and both 'pos' and 'neg' can be either NULL or a character vector. |
GmtList
testList <- list(list(name="GS_A", pos=NULL, neg=LETTERS[1:3]), list(name="GS_B", pos=LETTERS[1:5], neg=LETTERS[7:9]), list(name="GS_C", pos=LETTERS[1:5], neg=NULL), list(name="GS_D", pos=NULL, neg=NULL)) testSigndGS <- SignedGenesets(testList)