hist.bum {BioNet}R Documentation

Histogram of the p-value distribution with the fitted bum model

Description

The function plots a histogram of the p-values together with the fitted bum-model.

Usage

## S3 method for class 'bum'
hist(x, breaks=50, main="Histogram of p-values", xlab="P-values", ylab="Density", ...)

Arguments

x

Maximum likelihood estimator object of the beta-uniform mixture fit.

breaks

Breaks for the histogram.

main

An overall title for the plot.

xlab

A title for the x axis.

ylab

A title for the y axis.

...

Other graphic parameters for the plot.

Author(s)

Daniela Beisser

See Also

fitBumModel, hist.bum, bumOptim

Examples

data(pvaluesExample)
pvals <- pvaluesExample[,1]
mle <- fitBumModel(pvals, plot=FALSE)
hist(mle)

[Package BioNet version 1.44.0 Index]