chisq.test {AllelicImbalance}R Documentation

chi-square test

Description

Performs a chisq.test on an ASEset object.

Usage

## S4 method for signature 'ASEset'
chisq.test(x, y = "*")

Arguments

x

ASEset object

y

strand option

Details

The test is performed on one strand in an ASEset object.

Value

chisq.test returns a matrix with the chisq.test P-value for each SNP and sample

Author(s)

Jesper R. Gadin, Lasse Folkersen

See Also

Examples


#load example data
data(ASEset)

#make a chi-square test on default non-stranded strand 
chisq.test(ASEset)


[Package AllelicImbalance version 1.22.0 Index]