phaseMatrix2Array {AllelicImbalance} | R Documentation |
used to convert the phase from the visually friendly matrix to array.
phaseMatrix2Array(x, ...) ## S4 method for signature 'matrix' phaseMatrix2Array(x, dimnames = NULL, ...)
x |
matrix see examples |
... |
arguments to forward to internal functions |
dimnames |
list with dimnames |
A more effectice way of store the phase data in the ASEset object
Jesper R. Gadin, Lasse Folkersen
#load data data(ASEset) a <- ASEset #example phase matrix p1 <- matrix(sample(c(1,0),replace=TRUE, size=nrow(a)*ncol(a)),nrow=nrow(a), ncol(a)) p2 <- matrix(sample(c(1,0),replace=TRUE, size=nrow(a)*ncol(a)),nrow=nrow(a), ncol(a)) p <- matrix(paste(p1,sample(c("|","|","/"), size=nrow(a)*ncol(a), replace=TRUE), p2, sep=""), nrow=nrow(a), ncol(a)) ar <- phaseMatrix2Array(p)