getBarcodes | Get barcodes from idat file names |
getMethyLumiSet | Read idat files and create a 'MethyLumiSet' object |
getSNparams | Estimate parameters for finite mixture of Skew-Normal distributions |
panelPlots | Plot the distributions of the probe intensities and the components of the skew-normal mixture model |
preprocess | Normalize a MethyLumiSet object using some popular choices |
subsetProbes | Conveniently subset probes by type and retrieve the methylated or unmethylated intensities |