eigenMatMult |
Fast matrix multiplication using RcppEigen |
eigenResidop |
fast matrix residual operator using RcppEigen |
example_sce |
Subsetted mouse ESC 'SingleCellExperiment' object |
fastRUVIII |
A fast version of the ruv::RUVIII algorithm |
ruvSimulate |
Simulate a simple matrix or SingleCellExperiment to test internals of scMerge |
sce_cbind |
Combind several 'SingleCellExperiment' objects from different batches/experiments |
scMerge |
Perform the scMerge algorithm |
scReplicate |
Create replicate matrix for scMerge algorithm |
scRUVg |
RUVg function for single cell (under development) |
scRUVIII |
scRUVIII: RUVIII algorithm optimised for single cell data |
scSEGIndex |
scSEGIndex |
segList |
Stably expressed gene list in official gene symbols for both human and mouse |
segList_ensemblGeneID |
Stably expressed gene list in EnsemblGeneID for both human and mouse |