Integrative Statistics of alleLe Dependent Expression

Documentation for package ‘ISoLDE’ version 1.12.0

ISoLDE-package	INTEGRATIVE STATISTICS OF ALLELE DEPENDENT EXPRESSION
filteredASRcounts	NORMALIZED AND FILTERED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
filteredASRcounts.rda	NORMALIZED AND FILTERED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
filterT	FILTERING GENES BEFORE STATISTICAL ANALYSIS
ISoLDE	INTEGRATIVE STATISTICS OF ALLELE DEPENDENT EXPRESSION
isolde_test	Statistical analysis of Allele specific read (ASR) counts
normASRcounts	NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
normASRcounts_file	NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
normASRcounts_file.txt	NORMALIZED ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts	RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts_file	RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
rawASRcounts_file.txt	RAW ALLELE SPECIFIC READ (ASR) COUNTS FOR AN EXPERIENCE WITH MORE THAN TWO REPLICATES
readNormInput	READ THE NORMALIZED DATA FILE
readRawInput	READ THE RAW DATA FILE
readTarget	READ THE TARGET FILE
target	METADATA ABOUT THE ASR COUNT DATA.
target_file	METADATA ABOUT THE ASR COUNT DATA.
target_file.txt	METADATA ABOUT THE ASR COUNT DATA.