getPScreen {stageR} | R Documentation |
stageRClass
object.Return screening hypothesis p-values from a stageRClass
object.
getPScreen(object, ...) ## S4 method for signature 'stageR' getPScreen(object) ## S4 method for signature 'stageRTx' getPScreen(object)
object |
an object of the |
... |
Additional arguments |
A vector of screening stage (aggregated) p-values.
stageRTx
: Return screening hypothesis p-values from a stageRClass
object.
pScreen=c(seq(1e-10,1e-2,length.out=100),seq(1e-2,.2,length.out=100),seq(.2,1,length.out=100)) names(pScreen)=paste0("gene",1:300) pConfirmation=matrix(runif(900),nrow=300,ncol=3) dimnames(pConfirmation)=list(paste0("gene",1:300),c("H1","H2","H3")) stageRObj <- stageR(pScreen=pScreen, pConfirmation=pConfirmation) getPScreen(stageRObj)