shinySummarize-methods {shinyMethyl} | R Documentation |
Summarizing methylation data from a RGChannelSet or GenomicRatioSet into a shinyMethylSet needed to launch the interactive interface of shinyMethyl. That works for both the 450k and EPIC arrays.
## S4 method for signature 'RGChannelSet' shinySummarize(object) ## S4 method for signature 'GenomicRatioSet' shinySummarize(object)
object |
Either a |
Either a RGChannelSet
is transformed into a shinyMethylSet
, or a GenomicRatioSet
is transformed to a shinyMethylSet
Jean-Philippe Fortin jfortin@jhsph.edu
shinyMethylSet
for the output object and
RGChannelSet
or GenomicRatioSet
for the input object.
if (require(minfiData)){ library(minfiData) summarized.data <- shinySummarize(RGsetEx) }