read_profiles {seqCAT} | R Documentation |
Read SNV profiles in a directory.
read_profiles(profile_dir, remove_mt = TRUE)
profile_dir |
The directory containing the profiles to be read (path). |
remove_mt |
Remove or keep mitochondrial variants (boolean). |
This is a wrapper function for reading multiple SNV profiles present in a directory (and its sub-directories in recursive mode).
A list of GRanges objects.
# Path to test data profile_dir = system.file("extdata", package = "seqCAT") # Read test profiles profile_list <- read_profiles(profile_dir)