PWidentallprotssub {pwOmics} | R Documentation |
Internal subfunction for all protein pathway identification.
PWidentallprotssub(data_omics, genelists, genelist_ind, datab)
data_omics |
OmicsData object. |
genelists |
lists of genelists from chosen pathway databases |
genelist_ind |
integer specifying pathway database genelist matching; 1 = biocarta, 2 = kegg, 3 = nci, 4 = reactome. |
datab |
character vector indicating database name for message. |
OmicsData object with identified pathways for each protein.