parseSplicingEvent {psichomics}R Documentation

Parse an alternative splicing event based on a given identifier

Description

Parse an alternative splicing event based on a given identifier

Usage

parseSplicingEvent(event, char = FALSE, pretty = FALSE, extra = NULL,
  coords = FALSE)

Arguments

event

Character: event identifier

char

Boolean: return a single character instead of list with parsed values?

pretty

Boolean: return a prettier name of the event identifier?

extra

Character: extra information to add (such as species and assembly version); only used if pretty and char are TRUE

coords

Boolean: extra coordinates regarding the alternative and constitutive regions of alternative splicing events; only used if char is FALSE

Value

Parsed event

Examples

events <- c("SE_1_-_123_456_789_1024_TST",
            "MXE_3_+_473_578_686_736_834_937_HEY/YOU")
parseSplicingEvent(events)

[Package psichomics version 1.8.2 Index]