gutterPlot {plateCore} | R Documentation |
A Quality Control plot to check the number of events in each channel that are at either their minimum or maximum value. A large number of these events may indicate a problem with the sample.
gutterPlot(fp, chans = c("FSC-H", "SSC-H", "FL1-H", "FL2-H", "FL3-H", "FL4-H"), ...)
fp |
A |
chans |
Channels of interest to show on the |
... |
optional arguments |
Creates a plot where the x-axis is the different wells in a flowPlate, and the y-axis is the fraction of events at the boundary.
Jon Gosink and Errol Strain
library(plateCore) data(plateCore) ## Create a flowPlate fp <- flowPlate(pbmcPlate,wellAnnotation,"p1001") gutterPlot(fp,chans=c("FSC-H","SSC-H","FL1-H","FL2-H","FL3-H","FL4-H"))