getCellOnto {ontoProc}R Documentation

load ontologies that may include non-ascii strings and therefore cannot be in data folder

Description

load ontologies that may include non-ascii strings and therefore cannot be in data folder

Usage

getCellOnto()

getCellLineOnto()

getEFOOnto()

getChebiLite()

getCellosaurusOnto()

getUBERON_NE()

getChebiOnto()

getOncotreeOnto()

getDiseaseOnto()

getGeneOnto()

getHCAOnto()

Value

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex

instance of ontology_index (S3) from ontologyIndex,

Note

produced from HCAO.owl at https://github.com/HumanCellAtlas/ontology as of 15 Aug 2018

Examples

co = getCellOnto()
co
clo = getCellLineOnto()
length(clo$id)
che = getChebiLite()
length(che$id)
efo = getEFOOnto()
length(efo$id)

[Package ontoProc version 1.4.0 Index]