translate {miRNAtap}R Documentation

Homology transfer for miRNAtap

Description

This function maps gene entrez ID between species using homology information from Homologene.

Usage

translate(entrezes, from = "mmu", to = "rno", ...)

Arguments

entrezes

data.frame with entrez Gene IDs and their scores

from

origin species, default 'mmu', Mus musculus

to

target species, default

...

any optional arguments

Value

data.frame object with orthologous genes' entrez IDs and corresponding scores

Author(s)

Maciej Pajak m.pajak@sms.ed.ac.uk

Examples

mouse_genes <- data.frame(GeneID = 
        c("15364", "56520", "57781", "58180", "18035", "239857"))
translate(mouse_genes, from='mmu', to='rno')

[Package miRNAtap version 1.16.0 Index]