gbm {iClusterPlus} | R Documentation |
This is a subset of the glioblastoma dataset from the cancer genome atlas (TCGA) GBM study (2009) used in Shen et al. (2012).
data(gbm)
A list object containing three data matrices: copy number, methylation and mRNA expression in 84 samples.
gbm.seg |
GBM copy number segmentation results genereated by DNAcopy package. |
gbm.exp |
GBM gene expression data. |
gbm.mut |
GBM mutation data. |
Ronglai Shen, Qianxing Mo, Nikolaus Schultz, Venkatraman E. Seshan, Adam B. Olshen, Jason Huse, Marc Ladanyi, Chris Sander. (2012). Integrative Subtype Discovery in Glioblastoma Using iCluster. PLoS ONE 7, e35236