predict_time {brainImageR}R Documentation

Predict developmental time from gene expression data

Description

Predict human developmental time from expression dataset

Usage

predict_time(dat = NULL, genelist = NULL, minage = 8, maxage = 2120,
    tissue = NULL, minrsq = 0.6)

Arguments

dat

Normalized expression matrix

genelist

Optional: restrict analysis to gene list

minage

min pcw of the reference set. default = 8

maxage

max pcw of the reference set. default = 2120

tissue

Optional: restrict analysis to tissue (available)

minrsq

(range 0-1) model leniency. default = 0.5.

Value

spatiotemporal predictions.

Examples

#brainImageR:::loadworkspace()
##Load in the data
data(dat)
##predict time
#time <- predict_time(dat)

[Package brainImageR version 1.0.0 Index]