tis_in_region {brainImageR}R Documentation

List of regions that are supported by given tissue

Description

Brain areas supported by tissue of interest. Opposite=tis_set()

Usage

tis_in_region(composite, tissue_abrev)

Arguments

composite

object returned from SpatialEnrichment or CreateBrain

tissue_abrev

abreviation of the microdissected tissue of interest.

Value

general brain areas

Examples

#brainImageR:::loadworkspace()
##Load in a gene set
data(vth)
##calculate spatial enrichment
#composite <- SpatialEnrichment(vth, reps = 20, refset = "developing")
#tis_in_region(composite, "LHAa")

[Package brainImageR version 1.0.0 Index]