TissueSummary {brainImageR} | R Documentation |
. Quantifies the presence of gene list within each tissue
TissueSummary(genes, refset = c("developing", "adult"))
genes |
Genes to query for tissue location |
refset |
reference map. developing (default) or adult |
returns genes counts for each tissue
#Internal to brainImageR, used within SpatialEnrichment #First load in a gene set #brainImageR:::loadworkspace() data(vth) #tissueExp <- TissueSummary(vth, refset = "developing")