available_areanames {brainImageR} | R Documentation |
provides all brain areas within a slice for a refset.
available_areanames(composite, slice = NULL)
composite |
Object from either SpatialEnrichment or CreateBrain |
slice |
Section of the brain to be queried |
all areas present in the brain section of interest
#brainImageR:::loadworkspace() ##Load in a gene set data(vth) ##calculate spatial enrichment #composite <- SpatialEnrichment(vth, reps = 20, refset = "developing") #available_areanames(composite, slice = 5)